Survival-associated meQTLs across different cancer types


We identified 23,432 meQTLs associated with patient overall survival across different cancer types at FDR < 0.05.


e.g., "BLCA"
e.g., "rs11600543"


Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
log-rank test p-value
Sample size
Median survival time AA
Median survival time Aa
Median survival time aa
Dispaly
KIRP rs77100612 chr10:43467103 G/T 2.44E-5 286 25.82 26.4 11.43 KM Plot
KIRP rs77100959 chr6:148670661 A/G 9.7E-5 286 26.4 18.67 18.2 KM Plot
KIRP rs77115030 chr10:43155115 G/A 6.46E-5 288 25.57 27.75 11.43 KM Plot
KIRP rs77125767 chr10:74950136 A/T 9.55E-15 286 25.97 25.4 5.6 KM Plot
KIRP rs77126082 chr12:49837894 C/G 3.95E-6 287 25.57 39.53 10.97 KM Plot
KIRP rs77150496 chr10:43474111 T/C 2.4E-5 287 25.7 26.4 11.43 KM Plot
KIRP rs7715467 chr5:156468654 C/G 1.04E-7 286 12.78 23.68 26.37 KM Plot
KIRP rs77163988 chr2:47159679 C/T 2.62E-7 287 25.5 33.53 10.97 KM Plot
KIRP rs7717623 chr5:156440746 A/G 1.62E-7 286 12.78 25.98 26.1 KM Plot
KIRP rs77223792 chr6:148679243 G/GT 5.5E-6 285 26.4 19.63 17.13 KM Plot
KIRP rs77245016 chr7:20676909 A/T 2.38E-5 287 25.7 22.57 11.2 KM Plot
KIRP rs77329536 chr16:87602911 A/G 3.04E-5 281 26 25.7 18.23 KM Plot
KIRP rs77363306 chr10:74953412 C/G 1.14E-14 287 26.37 23.63 5.6 KM Plot
KIRP rs77403236 chr21:44231374 T/G 0.000106 284 25.23 40.7 13.07 KM Plot
KIRP rs77414882 chr7:20682145 A/T 2.38E-5 287 25.7 22.57 11.2 KM Plot